I want to use the Homer to do annotation.
After I input "annotatePeaks.pl 31512_TH0_D0.bed hg19 > 31512_TH0_D0.ann.txt" , it shows
"!!!!Genome hg19 not found in /home/jenny/NGStools/homer/.//config.txt"
I used the command "perl /home/jenny/NGStools/homer/configureHomer.pl -install hg19" to install it, and I am sure I installed the hg19 for the homer
Then input "perl /home/jenny/NGStools/homer/configureHomer.pl -list " to
In fact, I don't know how the read the config.txt of the Homer
Can you told me why I "Genome hg19 not found " in my Homer, please?
Best,
Jenny
After I input "annotatePeaks.pl 31512_TH0_D0.bed hg19 > 31512_TH0_D0.ann.txt" , it shows
"!!!!Genome hg19 not found in /home/jenny/NGStools/homer/.//config.txt"
I used the command "perl /home/jenny/NGStools/homer/configureHomer.pl -install hg19" to install it, and I am sure I installed the hg19 for the homer
Then input "perl /home/jenny/NGStools/homer/configureHomer.pl -list " to
In fact, I don't know how the read the config.txt of the Homer
Can you told me why I "Genome hg19 not found " in my Homer, please?
Best,
Jenny
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