Dear all,
I'm trying to obtain viral sequence loci in the human genome. Can anyone suggest an easy way to do this?
I found several endogenous retrovirus sites in papers, but i want to analyze other viruses also.
I have downloaded a virus database that contains 32102 viral genomes as fasta format. May I use blast or align to the hg19? Is there a catalog of these sites?
I would appreciate your help.
Regards,
Laszlo
I'm trying to obtain viral sequence loci in the human genome. Can anyone suggest an easy way to do this?
I found several endogenous retrovirus sites in papers, but i want to analyze other viruses also.
I have downloaded a virus database that contains 32102 viral genomes as fasta format. May I use blast or align to the hg19? Is there a catalog of these sites?
I would appreciate your help.
Regards,
Laszlo
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