Hey all,
I have been unable to do this. When running the two lines of code shown here at the top (http://samtools.sourceforge.net/mpileup.shtml) it states that -u is an illegal option. This is with version 1.18. Has anybody else experienced this or do any of you have a way to generate the consensus sequence?
I have been unable to do this. When running the two lines of code shown here at the top (http://samtools.sourceforge.net/mpileup.shtml) it states that -u is an illegal option. This is with version 1.18. Has anybody else experienced this or do any of you have a way to generate the consensus sequence?
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