Hi
I've downloaded some chip-seq data from geo (http://www.ncbi.nlm.nih.gov/geo/) and the only option is .wig format. I'd like the data in an 'ENCODE narrowPeak' style; i.e. something like
The original paper used macs for peak finding but it seems wig files are output from this tool not input! Can anyone tell me how to get .wig data into a peak list format I can make use of?
Many thanks
John
I've downloaded some chip-seq data from geo (http://www.ncbi.nlm.nih.gov/geo/) and the only option is .wig format. I'd like the data in an 'ENCODE narrowPeak' style; i.e. something like
chromosome start stop strand score p-value
Many thanks
John
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