Dear All,
It's hard to find SNPs in mitochondrial by samtools default setting, like D=100. I have explored several human genome data, NA18507, SJK, Venter, Watson, no snps found in ChrM.
For Chinese han, e.g YH genome, soap found 36 SNPs in chrM, seven are novel, samtools found nothing.
Can anyone explain? Thanks
It's hard to find SNPs in mitochondrial by samtools default setting, like D=100. I have explored several human genome data, NA18507, SJK, Venter, Watson, no snps found in ChrM.
For Chinese han, e.g YH genome, soap found 36 SNPs in chrM, seven are novel, samtools found nothing.
Can anyone explain? Thanks
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