in denovo assembly- do we go for the highest n50 or the smallest no. of genertaed nodes?
also, velvetoptimizer might be good in optimizing the parameters-
I never used it and can you advise me how to call the velvetoptimizer perl script which is present within contrib directory- what is the command please?
also, velvetoptimizer might be good in optimizing the parameters-
I never used it and can you advise me how to call the velvetoptimizer perl script which is present within contrib directory- what is the command please?
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