Dear all,
I had encountered some problem recently with blast makeblastdb.
$ ./makeblastdb -in transcript.fa -dbtype nucl -hash_index -parse_seqids -out transcript
makeblastdb protein
Building a new DB, current time: 07/16/2015 22:06:50
New DB name: transcript
New DB title: transcript.fa
Sequence type: Nucleotide
Keep Linkouts: T
Keep MBits: T
Maximum file size: 1000000000B
Segmentation fault (core dumped)
I found that some length of id in transcript.fa file are over 80 characters.
is there any solution for this ?
Thanks!!!
I had encountered some problem recently with blast makeblastdb.
$ ./makeblastdb -in transcript.fa -dbtype nucl -hash_index -parse_seqids -out transcript
makeblastdb protein
Building a new DB, current time: 07/16/2015 22:06:50
New DB name: transcript
New DB title: transcript.fa
Sequence type: Nucleotide
Keep Linkouts: T
Keep MBits: T
Maximum file size: 1000000000B
Segmentation fault (core dumped)
I found that some length of id in transcript.fa file are over 80 characters.
is there any solution for this ?
Thanks!!!
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