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02-23-2012, 09:11 AM
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#1 |
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Member
Location: Atlanta, US Join Date: Jan 2010
Posts: 59
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TCGA RNA-Seq
Hi there,
Is anyone here using TCGA's raw RNA-Seq data? If so, could please tell if those the fastq files need to be adapter trimmed before alignment. Thanks. |
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02-27-2012, 06:09 AM
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#2 |
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Senior Member
Location: East Coast USA Join Date: Feb 2008
Posts: 7,089
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Not sure if the info you are looking for is in here: https://wiki.nci.nih.gov/display/TCG...ser%27s+Guides
Last edited by GenoMax; 02-27-2012 at 06:21 AM. |
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02-27-2012, 12:12 PM
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#3 |
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Member
Location: Atlanta, US Join Date: Jan 2010
Posts: 59
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@GenoMax:
Thanks a lot. I was looking through the help wiki already. I think I've figured out the solution to the problem. If you like, please see: http://seqanswers.com/forums/showthread.php?t=17939 Thanks once again. |
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