Go Back   SEQanswers > General

Similar Threads
Thread Thread Starter Forum Replies Last Post
GO term enrichment with non-model organism (I have the GO terms for every locus) Genomics101 Bioinformatics 4 04-28-2014 09:04 AM
miRNA target prediction for non-model-organism MichalGordon Bioinformatics 2 06-21-2013 01:44 AM
rambling on core facility model samanta General 3 10-11-2012 01:03 PM
GATK with non-model organism (Help with making SNP VCF file)) newbietonextgen Bioinformatics 7 09-10-2012 08:59 AM
PubMed: Optical mapping of DNA: Single-molecule-based methods for mapping genomes. Newsbot! Literature Watch 0 01-06-2011 03:00 AM

Thread Tools
Old 05-26-2016, 03:05 PM   #1
Location: Maryland, USA

Join Date: May 2012
Posts: 60
Default Looking for a facility for optical mapping a non-model organism


I am looking for a facility, preferably in the US, that can work with us to make an optical map of a gastropod genome.

Nothing has been done like this before, but we have a lot of short and long read sequence to find markers and access to high-molecular weight DNA. All we need is a place to do the mapping with us, something our local core-facility doesn't offer.

We have the funding we just need a place and people with enough expertise to work with something new.
Genomics101 is offline   Reply With Quote
Old 12-07-2017, 01:03 PM   #2
Location: Boston

Join Date: Jun 2014
Posts: 12

I know this is old, but I'm considering optical mapping instead of supplemental long reads. Did you ever find a core, what was the rough cost and did you ultimately find it useful?
ksawatzki is offline   Reply With Quote

core facility, optical mapping

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 11:02 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO