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Old 02-20-2014, 01:45 PM   #1
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Location: San Antonio

Join Date: Feb 2014
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Default Complete Genomics CNVs and SVs

Any suggestions for tools/pipelines to identify CNVs and SVs from Complete Genomics data? Anyone with any experience doing this?

Has anyone tested how well any of the following tools work when using the sam/bam files created by the evidence2sam function in CGAtools?


Fell free to comment on anything you have tried.
I will update this thread as I try different tools.
augustblackburn is offline   Reply With Quote

complete genomics, copy number analysis, pipeline development, structural variation

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