I have two replicates for each sample and would like to downstream differential gene expression analysis. I could do some correlation analysis, either pearson or spearman. I also scatterplot them (examples attached here). Just wonder how I would tell if the replicates are consistent with each other. I mean for the examples I provided here, can I treat them as replicates?
Thank you very much for any inputs!
Thank you very much for any inputs!
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