Hi! I'm trying to install the Bowtie tool for my genomic processing class, but with no success.
I downloaded the windows 32 bit .zip file from sourceforge and unzipped it. Set the environment path and then tried to run a few simple commands from the command line.
The command I tried was:
It always gives me "Bowtie is an unrecognized command". I don't really know what to do to get this tool running. I'd appreciate the help!
I downloaded the windows 32 bit .zip file from sourceforge and unzipped it. Set the environment path and then tried to run a few simple commands from the command line.
The command I tried was:
Code:
bowtie -t e_coli reads/e_coli_1000.fq e_coli.map
It always gives me "Bowtie is an unrecognized command". I don't really know what to do to get this tool running. I'd appreciate the help!
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