Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Need help figuring out these errors in Python code... Please help

    Hey guys I'm having issues finding solutions to these problems for my RNAseq python project can anyone help?
    Code:
    Traceback (most recent call last):
      File "<input>", line 1, in <module>
      File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_bundle/pydev_umd.py", line 197, in runfile
        pydev_imports.execfile(filename, global_vars, local_vars)  # execute the script
      File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_imps/_pydev_execfile.py", line 18, in execfile
        exec(compile(contents+"\n", file, 'exec'), glob, loc)
      File "/Users/screadore/Desktop/RNAcode/CodePackageE.py", line 118, in <module>
        df = get_data()
    Last edited by GenoMax; 09-10-2019, 08:56 AM. Reason: Added [code] tags

  • #2
    You need to provide more information about what software you are running, how you are running it. Is it custom code you wrote or a package that is available on web?

    Comment


    • #3
      Originally posted by screadore View Post
      Hey guys I'm having issues finding solutions to these problems for my RNAseq python project can anyone help?
      Code:
      Traceback (most recent call last):
        File "<input>", line 1, in <module>
        File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_bundle/pydev_umd.py", line 197, in runfile
          pydev_imports.execfile(filename, global_vars, local_vars)  # execute the script
        File "/Applications/PyCharm.app/Contents/helpers/pydev/_pydev_imps/_pydev_execfile.py", line 18, in execfile
          exec(compile(contents+"\n", file, 'exec'), glob, loc)
        File "/Users/screadore/Desktop/RNAcode/CodePackageE.py", line 118, in <module>
          df = get_data()

      cross-posted in https://www.reddit.com/r/Python/comm..._these_issues/

      Comment

      Latest Articles

      Collapse

      • seqadmin
        Strategies for Sequencing Challenging Samples
        by seqadmin


        Despite advancements in sequencing platforms and related sample preparation technologies, certain sample types continue to present significant challenges that can compromise sequencing results. Pedro Echave, Senior Manager of the Global Business Segment at Revvity, explained that the success of a sequencing experiment ultimately depends on the amount and integrity of the nucleic acid template (RNA or DNA) obtained from a sample. “The better the quality of the nucleic acid isolated...
        03-22-2024, 06:39 AM
      • seqadmin
        Techniques and Challenges in Conservation Genomics
        by seqadmin



        The field of conservation genomics centers on applying genomics technologies in support of conservation efforts and the preservation of biodiversity. This article features interviews with two researchers who showcase their innovative work and highlight the current state and future of conservation genomics.

        Avian Conservation
        Matthew DeSaix, a recent doctoral graduate from Kristen Ruegg’s lab at The University of Colorado, shared that most of his research...
        03-08-2024, 10:41 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by seqadmin, Yesterday, 06:37 PM
      0 responses
      12 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, Yesterday, 06:07 PM
      0 responses
      10 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 03-22-2024, 10:03 AM
      0 responses
      51 views
      0 likes
      Last Post seqadmin  
      Started by seqadmin, 03-21-2024, 07:32 AM
      0 responses
      68 views
      0 likes
      Last Post seqadmin  
      Working...
      X