I ran cuffcompare with the -r option and got class codes which are not written in the manual.
I don't know what the "-" and the "." classes stand for. On the other hand I don't have the "u" class.
Thanks
Code:
cut -f2 cuffcompare.tracking | sort | uniq -c 3852 = 171 - 11919 . 159666 c 18619 e 2 i 11263 j 12492 o 53 p
Thanks
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