Go Back   SEQanswers > Applications Forums > Clinical Sequencing

Similar Threads
Thread Thread Starter Forum Replies Last Post
Where to find public sequencing data with signal intensity for each base? Mark2 Bioinformatics 10 01-08-2015 11:30 AM
Raw genotype and SNP p-value data kdarbs Bioinformatics 0 05-31-2013 09:45 AM
illumina raw genotype data format nans_bn Illumina/Solexa 1 11-21-2012 04:54 PM
genotype likelihood inconsist with genotype field in mpileup output plantae Bioinformatics 0 03-26-2012 08:10 PM
Why do I find the sequencing primer sequence in my data? soev Bioinformatics 2 11-17-2011 02:07 AM

Thread Tools
Old 05-23-2016, 05:35 PM   #1
Junior Member
Location: Hong Kong

Join Date: Jun 2015
Posts: 7
Default Where can I find sequencing data with known genotype?

Hello all,

I'm trying to find sets of public sequencing data with verified/known genotype in order to test my bioinformatics pipeline (for genomic SNP calling). Can anyone tell me in what ways I can find those data?
QazSeDc is offline   Reply With Quote
Old 05-23-2016, 06:41 PM   #2
Richard Finney
Senior Member
Location: bethesda

Join Date: Feb 2009
Posts: 689

Check out genome in a bottle.
Richard Finney is offline   Reply With Quote

genotype, sequencing data, snp calling, validation

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 09:49 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO