SEQanswers used as a reference in Nature Biotech paper!

ECO · 10-12-2008, 07:59 PM

Thought this was a worthy milestone in SEQanswers' existence. While reading the next-gen focus in this issue of Nature Biotech, I came across the following table summarizing software packages:

...note small print.

We're official people!

Many thanks again to sci_guy and everyone else who contributed to the epic bioinformatics tools thread referenced above!

Thanks also to Jay Shendure and Hanlee Ji for stopping by. Would love to see you both post!

B_T · 10-13-2008, 08:01 AM

Congratulations!!

BT

fnielsen · 10-13-2008, 11:27 PM

SEQanswers was also used to compile this list from NBIC (Netherlands Bioinformatics Centre):

https://wiki.nbic.nl/index.php/High_...put_sequencing

The good thing about this list is that it features a description of each package, and since it is a Wiki it has a chance of staying up-to-date.

ECO · 10-13-2008, 11:36 PM

Quote:

Originally Posted by fnielsen

SEQanswers was also used to compile this list from NBIC (Netherlands Bioinformatics Centre):

https://wiki.nbic.nl/index.php/High_...put_sequencing

The good thing about this list is that it features a description of each package, and since it is a Wiki it has a chance of staying up-to-date.

Nice site.

You have a problem with your site certificate (not sure why you're specifying https) which prevents the site from loading properly for firefox users.

Also, you're missing ABI as a next gen seq provider.

zee · 10-15-2008, 04:12 AM

It's good to see articles like this, especially since the technology platforms are in such a state of flux. The authors dont claim a complete list and Seqanswers probably have the most comprehensive listing I've seen so far.

Congrats are in order

sci_guy · 10-26-2008, 11:28 PM

Nice one

Quote:

Originally Posted by fnielsen

The good thing about this list is that it features a description of each package, and since it is a Wiki it has a chance of staying up-to-date.

I find the fact the thread is helping a populate a wiki amusing considering the thread was born out of a wiki I maintain for my organisation.

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Cufflinks paper published at Nature Biotechnology	Cole Trapnell	Bioinformatics	4	04-17-2011 02:27 PM
Cufflinks - Nature Biotech data sets	adrian	Bioinformatics	1	04-16-2011 05:40 PM
Helicos: Yeast Transcriptomics in Nature Biotech	ECO	Helicos / Direct Genomics	0	07-11-2009 01:03 AM
Nature Biotech: Sequencing in real time	mgenome	Literature Watch	0	02-09-2009 08:05 PM
Nature Biotech: Next Gen DNA Sequencing Focus	ECO	Literature Watch	0	10-12-2008 07:43 PM

10-12-2008, 07:59 PM	#1
ECO --Site Admin-- Location: SF Bay Area, CA, USA Join Date: Oct 2007 Posts: 1,358	SEQanswers used as a reference in Nature Biotech paper! Thought this was a worthy milestone in SEQanswers' existence. While reading the next-gen focus in this issue of Nature Biotech, I came across the following table summarizing software packages: ...note small print. We're official people! Many thanks again to sci_guy and everyone else who contributed to the epic bioinformatics tools thread referenced above! Thanks also to Jay Shendure and Hanlee Ji for stopping by. Would love to see you both post!

10-13-2008, 11:27 PM	#3
fnielsen Junior Member Location: Nijmegen Join Date: Oct 2008 Posts: 1	List of Seq tools SEQanswers was also used to compile this list from NBIC (Netherlands Bioinformatics Centre): https://wiki.nbic.nl/index.php/High_...put_sequencing The good thing about this list is that it features a description of each package, and since it is a Wiki it has a chance of staying up-to-date.

10-13-2008, 08:01 AM	#2
B_T Junior Member Location: SoCal, USA Join Date: Oct 2007 Posts: 2	Congratulations!! BT

10-15-2008, 04:12 AM	#5
zee NGS specialist Location: Malaysia Join Date: Apr 2008 Posts: 249	It's good to see articles like this, especially since the technology platforms are in such a state of flux. The authors dont claim a complete list and Seqanswers probably have the most comprehensive listing I've seen so far. Congrats are in order