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Old 07-16-2018, 12:47 PM   #1
cmccabe
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Location: chicago

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Default Ilummina data transfer from sequencer

Is there an api or alternative that can be used to transfer the fastq from the nextseq 550 to a centos server? I am familiar with ion torrent data where this is possible but am not sure how or if it is possible with the next seq. Are there other ways that may be possible interruption or data loss? Thank you.
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Old 07-17-2018, 06:50 AM   #2
GenoMax
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Default

Export a network share from the CentOS server. Mount it on NextSeq 550. You can then choose that share as the destination to write data to. If you don't want to do it that way you could manually copy the folder over after a run is complete.
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