Hi,
I have a single computer with multiple cores, I use pblat at http://icebert.github.io/pblat/
I got only empty temp files as well as empty outpout
I really do not understand what is the nature of the problem, I think a memory problem
I run it like following : nohup `sudo ./Jobs_pblat.sh` &
the Jobs_pblat.sh contains : $PRGEXEC/pblat -threads=12 -prot -trimT -out=blast9 -minIdentity=25 $DB/db.faa $INFILE/"Orfs.faa" -out=blast9 $RESULTDIR/"Orfs_blat_outblast9_results.out"
Anybody has the same issue with pblat
Thanks for reading my thread
I have a single computer with multiple cores, I use pblat at http://icebert.github.io/pblat/
I got only empty temp files as well as empty outpout
I really do not understand what is the nature of the problem, I think a memory problem
I run it like following : nohup `sudo ./Jobs_pblat.sh` &
the Jobs_pblat.sh contains : $PRGEXEC/pblat -threads=12 -prot -trimT -out=blast9 -minIdentity=25 $DB/db.faa $INFILE/"Orfs.faa" -out=blast9 $RESULTDIR/"Orfs_blat_outblast9_results.out"
Anybody has the same issue with pblat
Thanks for reading my thread
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