Hi, does anybody know if there is any "official" document about guidelines for ChIP-seq experiments similar to the MIAME or MIQE criteria for microarrays and qPCR? If not, could anyone provide with some ideas on appropriate read length, depth, controls, ...etc.?
As an example within the NGS world, for RNA-seq I found a very useful resource in the Standards, Guidelines and Best Practices for RNA-Seq V1.0 (June 2011) The ENCODE Consortium:
Thanks!
Fernando
As an example within the NGS world, for RNA-seq I found a very useful resource in the Standards, Guidelines and Best Practices for RNA-Seq V1.0 (June 2011) The ENCODE Consortium:
Thanks!
Fernando
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