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Old 12-13-2017, 12:08 AM   #1
r1corre
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Location: Britanny, France

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Default using gap closer with PE 300 bases reads

Hi

Gap-closer was initially developed to work with reads of a maximum size of 150 nuc.
How does GapCloser react with 2x300 nuc reads ?
Does it use only the first 150 nuc or is the full information in the 300nuc used for gap closing?

Is there special parameters to set for this kind of reads?

Thanks for your help

Erwan
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