Galaxy Architecture Documentation for Developers

oren · 09-19-2011, 09:16 AM

Dear All,

I am a software developer, new to Galaxy. Is there a detailed document about the Galaxy code architecture, API, what runners are, and how to write a runner? I could not find this information on the Galaxy Wiki.

I am especially interested in integrating Galaxy with an external scheduler software (I am aware of Galaxy's scheduling capabilities). I'd like to intercept Galaxy workflows and send their object model to my scheduler.

Thank you so much in advance,
Oren Livne

maubp · 09-20-2011, 01:03 AM

Probably more suited for the galaxy-dev mailing list, since I'm pretty sure this is something you'd have to modify the Galaxy source to achieve:
http://lists.bx.psu.edu/pipermail/ga...er/006904.html

tnabtaf · 09-20-2011, 10:02 AM

This thread is continued on the galaxy-user list:
http://gmod.827538.n3.nabble.com/Gal...td3349145.html

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09-19-2011, 09:16 AM	#1
oren Junior Member Location: Chicago Join Date: Sep 2011 Posts: 1	Galaxy Architecture Documentation for Developers Dear All, I am a software developer, new to Galaxy. Is there a detailed document about the Galaxy code architecture, API, what runners are, and how to write a runner? I could not find this information on the Galaxy Wiki. I am especially interested in integrating Galaxy with an external scheduler software (I am aware of Galaxy's scheduling capabilities). I'd like to intercept Galaxy workflows and send their object model to my scheduler. Thank you so much in advance, Oren Livne

09-20-2011, 01:03 AM	#2
maubp Peter (Biopython etc) Location: Dundee, Scotland, UK Join Date: Jul 2009 Posts: 1,543	Probably more suited for the galaxy-dev mailing list, since I'm pretty sure this is something you'd have to modify the Galaxy source to achieve: http://lists.bx.psu.edu/pipermail/ga...er/006904.html

09-20-2011, 10:02 AM	#3
tnabtaf Member Location: Oregon Join Date: Jan 2011 Posts: 53	This thread is continued on the galaxy-user list: http://gmod.827538.n3.nabble.com/Gal...td3349145.html