Time to publish SEQanswers? - Page 21

robs · 12-21-2011, 10:49 AM

Quote:

Originally Posted by marcowanger

Important things to do now

1> Please suggest success cases of using SEQanswers (see http://seqanswers.com/wiki/Publicati...for_SEQanswers for current suggested case studies)

2> Rearrange the figures (see gdoc)

1> I tried to put the use cases in text form from the current list. I rearranged them so they are grouped together. Feel free to convert back to the list if you don't like it. We need to add some more examples of how the discussions lead to publications (at least one example, if we have).

2> done

robs · 12-21-2011, 10:51 AM

Quote:

Originally Posted by marcowanger

Hi all,

I think the MS is almost ready now !!!!

We have written a lot today.

I agree, we did a lot during the last days. If we keep up the good work, we should be able to have something ready by the end of the week.

marcowanger · 12-21-2011, 10:05 PM

Quote:

Originally Posted by robs

I agree, we did a lot during the last days. If we keep up the good work, we should be able to have something ready by the end of the week.

One thing I want to ask about Figure 1B.

Why is it "Forum Readership"? Should it be "Countries Members from" or sort of things?

robs · 12-22-2011, 10:22 AM

Quote:

Originally Posted by marcowanger

One thing I want to ask about Figure 1B.

Why is it "Forum Readership"? Should it be "Countries Members from" or sort of things?

Because this data is based on the Google Analytics viewer numbers and does not imply SEQanswers members, only people reading the forum.

marcowanger · 12-22-2011, 05:57 PM

Quote:

Originally Posted by robs

Because this data is based on the Google Analytics viewer numbers and does not imply SEQanswers members, only people reading the forum.

robs, i got it. Thanks for clarification on this.

adaptivegenome · 12-23-2011, 07:54 AM

Guys,

Genome Medicine is a relatively new journal and there have been only 13 correspondence articles so far. I read all of them and I think the follow two (particularly the first) are most applicable to us (in style/structure, not content):

http://genomemedicine.com/content/pdf/gm13.pdf
http://genomemedicine.com/content/pdf/gm145.pdf

marcowanger · 12-23-2011, 10:29 PM

Quote:

Originally Posted by genericforms

Guys,

Genome Medicine is a relatively new journal and there have been only 13 correspondence articles so far. I read all of them and I think the follow two (particularly the first) are most applicable to us (in style/structure, not content):

http://genomemedicine.com/content/pdf/gm13.pdf
http://genomemedicine.com/content/pdf/gm145.pdf

All ideas so far incorporated into the main text.

marcowanger · 12-25-2011, 08:28 AM

we need to write a cover letter, including

1> why the manuscript should be published (in general)

2> why the manuscript should be in Genome Med. (http://genomemedicine.com/about#trials)

3> declare any potential competing interests

4> provide the contact details (including email addresses) of potential peer reviewers for your manuscript.

adaptivegenome · 12-25-2011, 12:10 PM

Yes. This is basically the letter I sent for pre approval. We can slightly revise and use that. Are you going to send around a new version of the local WORD document?

marcowanger · 12-25-2011, 09:49 PM

Quote:

Originally Posted by genericforms

Yes. This is basically the letter I sent for pre approval. We can slightly revise and use that. Are you going to send around a new version of the local WORD document?

yes, if the gdoc is not heavily modified, i can fix and citations and send the local WORD out tonight.

marcowanger · 12-26-2011, 09:32 AM

Robs, can you double check on the calculation regarding the following claim?

Quote:

After all, this feature is barely used. PLoS series, boasting >66M HTML page views, only have 1.6% of their publications with more than two comments and 9.5% with at least one comment2

robs · 12-26-2011, 10:50 PM

Quote:

Originally Posted by marcowanger

Robs, can you double check on the calculation regarding the following claim?

The exact number of page views is 66,469,893.
Number of publications: 33,128
Number of publications with at least one comment: 3,159
Number of publications with more than two comments: 516

marcowanger · 12-26-2011, 10:55 PM

Quote:

Originally Posted by robs

The exact number of page views is 66,469,893.
Number of publications: 33,128
Number of publications with at least one comment: 3,159
Number of publications with more than two comments: 516

Thanks robs

robs · 12-26-2011, 11:13 PM

Quote:

Originally Posted by marcowanger

Thanks robs

We could include those numbers in parenthesis if you think it will be useful.

severin · 12-27-2011, 07:17 AM

Hi everyone,

Eco mentioned that someone might have a complete postdump as an SQL file of all the forums. I would like to generate a few tag clouds of some of forums for a poster I will be present in a few weeks. Can someone hook me up with this file? andrewseverin@gmail.com

marcowanger · 12-27-2011, 07:25 AM

Quote:

Originally Posted by severin

Hi everyone,

Eco mentioned that someone might have a complete postdump as an SQL file of all the forums. I would like to generate a few tag clouds of some of forums for a poster I will be present in a few weeks. Can someone hook me up with this file? andrewseverin@gmail.com

Hi Andrew, let me find

marcowanger · 12-27-2011, 07:27 AM

Quote:

Originally Posted by severin

Hi everyone,

Eco mentioned that someone might have a complete postdump as an SQL file of all the forums. I would like to generate a few tag clouds of some of forums for a poster I will be present in a few weeks. Can someone hook me up with this file? andrewseverin@gmail.com

BTW, I am not sure if ECO mind sharing the SQL dump not for the publication of SEQanswers. I think it would be better let him give the green light here or let him know?

severin · 12-27-2011, 08:38 AM

Thanks Marco,

I spoke with him in PM about this. I will be sure to cite seqanswers.

marcowanger · 12-27-2011, 08:42 AM

Quote:

Originally Posted by severin

Thanks Marco,

I spoke with him in PM about this. I will be sure to cite seqanswers.

Please check email

Joann · 12-27-2011, 10:01 AM

How about also posting your poster here for us when it is complete and you have presented it? I am sure we are an interested audience.

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12-25-2011, 08:28 AM	#408
marcowanger Senior Member Location: Hong Kong Join Date: Dec 2008 Posts: 350	we need to write a cover letter, including 1> why the manuscript should be published (in general) 2> why the manuscript should be in Genome Med. (http://genomemedicine.com/about#trials) 3> declare any potential competing interests 4> provide the contact details (including email addresses) of potential peer reviewers for your manuscript. __________________ Marco

12-27-2011, 07:17 AM	#415
severin Genome Informatics Facility Location: Iowa @isugif Join Date: Sep 2009 Posts: 105	tag cloud Hi everyone, Eco mentioned that someone might have a complete postdump as an SQL file of all the forums. I would like to generate a few tag clouds of some of forums for a poster I will be present in a few weeks. Can someone hook me up with this file? andrewseverin@gmail.com

12-27-2011, 08:38 AM	#418
severin Genome Informatics Facility Location: Iowa @isugif Join Date: Sep 2009 Posts: 105	sql dump Thanks Marco, I spoke with him in PM about this. I will be sure to cite seqanswers.

12-27-2011, 10:01 AM	#420
Joann Senior Member Location: Woodbridge CT Join Date: Oct 2008 Posts: 231	post the poster? How about also posting your poster here for us when it is complete and you have presented it? I am sure we are an interested audience.

12-23-2011, 07:54 AM	#406
adaptivegenome Super Moderator Location: US Join Date: Nov 2009 Posts: 436	Guys, Genome Medicine is a relatively new journal and there have been only 13 correspondence articles so far. I read all of them and I think the follow two (particularly the first) are most applicable to us (in style/structure, not content): http://genomemedicine.com/content/pdf/gm13.pdf http://genomemedicine.com/content/pdf/gm145.pdf

12-25-2011, 12:10 PM	#409
adaptivegenome Super Moderator Location: US Join Date: Nov 2009 Posts: 436	Yes. This is basically the letter I sent for pre approval. We can slightly revise and use that. Are you going to send around a new version of the local WORD document?