Hi,
I'd like to extract the variant information for Europe population from 1000 Genomes project data. I had the list of individual ID and corresponding population and I had a list of SNPs downloaded from 1KG (but it is for all populations). How can I extract SNP information of Europe population? How to get the allele frequency of those SNPs?
Thanks!
I'd like to extract the variant information for Europe population from 1000 Genomes project data. I had the list of individual ID and corresponding population and I had a list of SNPs downloaded from 1KG (but it is for all populations). How can I extract SNP information of Europe population? How to get the allele frequency of those SNPs?
Thanks!