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  • Free software that can trim .ab1 files?

    Does anyone know if there is any free software that allows trimming of .ab1 files using a quality score average window and can output .ab1 files? I think Chromas can do this, but it is not free.

  • #2
    I think the chromatogram explorer can do what you are looking for (http://www.dnabaser.com/download/chromatogram-explorer/)
    The lite version is freeware and has almost all features.

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    • #3
      Thanks I will check it out.

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      • #4
        Have you tried with the software ABI Seq Scanner? Is free, but you have to do the trim manually. At the end you can save the edited .ab1 file..

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        • #5
          Does anyone know if there is any free software that allows trimming of .ab1 files using a quality score average window and can output .ab1 files? I think Chromas can do this, but it is not free.???

          ______________
          GuL

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          • #6
            Why not SCF? Maybe lucy or Staden's pregap4?

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            • #7
              Sequencher

              Have you tried with Sequencher? You can use a demo version and in the section sequence>trim>trim parameters you can set your "personal trimming values", so perhaps you can save and export sequence. Try!

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