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Old 07-30-2013, 02:13 PM   #1
syintel87
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Join Date: Dec 2012
Posts: 81
Default [R - Bioconductor] TSSi error message

Hello,

While running TSSi, error has kept occuring.
The error message says, "Error in .local(counts, start, end, chr, region, strand, replicate, annotation, : Duplicated start positions within a replicate are not allowed.".
However, when I checked starting sites across all the rows, all start sites were unique in each row. The below is a part of my input data.
Would you please give me a tip to solve this problem?

Thank you in advance.



chromosome region start strand counts
1 s0 gene1 1425 + 3071
2 s0 gene1 1637 + 3146
3 s0 gene1 2143 + 910
4 s0 gene1 2333 + 95
5 s0 gene1 2652 + 12507
6 s0 fgene1 4027 + 6
7 s0 fgene1 4141 + 36
8 s0 fgene1 4311 + 91
9 s0 fgene1 4471 + 28
10 s0 fgene1 4635 + 5
11 s0 fgene1 4760 + 95
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