Hi all,
We have been running SOAPdenovo for fungal genomes and have seen that there seems to be a bias for assembling repetitive elements and increasing assembly size with kmers above 49. Does anyone know is this is something that has to do with the algorithm?
We have been running SOAPdenovo for fungal genomes and have seen that there seems to be a bias for assembling repetitive elements and increasing assembly size with kmers above 49. Does anyone know is this is something that has to do with the algorithm?