Paired RNA-seq data for Arabidopsis

cindylanzao · 07-30-2015, 02:17 AM

Hi, all

I have just built a RNA-seq pipeline for Arabidopsis, and do need a set of paired sample of RNA-seq PE or SE data for Arabidopsis, can someone tell me where can I find this kind of data. Thanks so much for anyone who could offer me help!

GenoMax · 07-30-2015, 04:00 AM

Sequence Read Archive (and an appropriate search):

1. http://www.ncbi.nlm.nih.gov/sra/?term=arabidopsis
2. http://sra.dnanexus.com/

cindylanzao · 07-30-2015, 07:09 PM

Quote:

Originally Posted by GenoMax

Sequence Read Archive (and an appropriate search):

1. http://www.ncbi.nlm.nih.gov/sra/?term=arabidopsis
2. http://sra.dnanexus.com/

Thanks, those website are really helpful!

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07-30-2015, 02:17 AM	#1
cindylanzao Member Location: chicago Join Date: Nov 2012 Posts: 19	Paired RNA-seq data for Arabidopsis Hi, all I have just built a RNA-seq pipeline for Arabidopsis, and do need a set of paired sample of RNA-seq PE or SE data for Arabidopsis, can someone tell me where can I find this kind of data. Thanks so much for anyone who could offer me help!

07-30-2015, 04:00 AM	#2
GenoMax Senior Member Location: East Coast USA Join Date: Feb 2008 Posts: 7,088	Sequence Read Archive (and an appropriate search): 1. http://www.ncbi.nlm.nih.gov/sra/?term=arabidopsis 2. http://sra.dnanexus.com/