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Old 05-28-2013, 10:08 PM   #1
juannajuann
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Default blastn and phylogenetic tree

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Last edited by juannajuann; 12-31-2013 at 05:13 AM.
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Old 05-28-2013, 10:39 PM   #2
rhinoceros
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Since these are 16S sequences you could just use e.g. PyNAST and add them to some existing alignment (silva, greengenes, etc.)..
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Old 05-29-2013, 12:15 AM   #3
juannajuann
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Can you show some example on how to do it?

I am not familiar with this since I am just a beginner on this method.
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Old 05-29-2013, 12:55 AM   #4
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http://qiime.org/pynast/install.html
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Old 05-29-2013, 03:38 PM   #5
juannajuann
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Can someone teach me how to do phylogenetic tree.
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Old 05-29-2013, 06:41 PM   #6
kmcarr
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Are you asking us to do your homework for you?
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