Hi,
I am trying to analyze my RNA-seq data with DESeq
my count_table appear as follow
C1_count C2_count C3_count T1_count T2_count T3_count
1 fdoG 1898 2819 2159 2713 3388 3273
2 fdoH 364 596 470 552 667 643
3 fdoI 163 257 215 237 302 273
4 fdhE 324 537 442 406 596 607
5 selA 289 587 551 553 639 618
6 SMa0013 119 256 221 238 302 251
when I try
>cds <- newCountDataSet(count_table, conds)
I get the following error message:
Error in round(countData) : Non-numeric argument to mathematical function
Does anyone help me?
Thanks
Carmen
I am trying to analyze my RNA-seq data with DESeq
my count_table appear as follow
C1_count C2_count C3_count T1_count T2_count T3_count
1 fdoG 1898 2819 2159 2713 3388 3273
2 fdoH 364 596 470 552 667 643
3 fdoI 163 257 215 237 302 273
4 fdhE 324 537 442 406 596 607
5 selA 289 587 551 553 639 618
6 SMa0013 119 256 221 238 302 251
when I try
>cds <- newCountDataSet(count_table, conds)
I get the following error message:
Error in round(countData) : Non-numeric argument to mathematical function
Does anyone help me?
Thanks
Carmen
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