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08-14-2014, 02:26 PM
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#1 |
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Member
Location: Baton Rouge, Louisiana Join Date: Jun 2011
Posts: 11
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RNAseq .wig files
Hello all! I need to analyze some RNAseq data in .wig (wiggle) format, that I obtained from a paper, but I am unfamiliar with this format. I want to filter for a certian set of genes (ovary related) and then sort based on differential expression. Have you had experience with .wig files? Can anyone point me in a helpfull direction?
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08-14-2014, 02:43 PM
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#2 |
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Senior Member
Location: East Coast USA Join Date: Feb 2008
Posts: 7,080
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Information about the .wig format: https://genome.ucsc.edu/goldenPath/help/wiggle.html
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08-14-2014, 03:24 PM
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#3 |
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Member
Location: Baton Rouge, Louisiana Join Date: Jun 2011
Posts: 11
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I found a post on BioStar that suggested using BEDOPS to convert to the more common BED file and proceed in analysis from there.
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