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Old 09-08-2011, 09:57 PM   #1
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Default Where can I find FASTQ files along with reference genomes for various species?

Please could anyone direct me to sources (ftp or otherwise) where I could find a number of FASTQ files pertaining to various organisms along with the links for the corresponding reference genome sequences?
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Old 09-09-2011, 04:30 AM   #2
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You can obtain sequences in fastq format from short sequence read archive at NCBI (, GEO (search for "high throughput sequencing"[Platform Technology Type]) or European nucleotide archive ( You can find the reference genomes at NCBI.

Last edited by GenoMax; 09-09-2011 at 04:34 AM.
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fasta, fastq, ngs data

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