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12-08-2011, 10:21 PM
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#1 |
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Member
Location: Japan Join Date: Mar 2011
Posts: 11
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RNA-seq analysis
Hi All,
I'm new to RNA-seq analysis,I've RNA-seq data for different time points (time course experiment) and i would like to analyze it to get differentially expressed genes,i have table with counts for each gene at each time point,what is the most suitable tool or R package to use for getting differentially expressed genes?? Thank you in advance |
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12-09-2011, 03:06 AM
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#2 |
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Member
Location: Croatia Join Date: Sep 2010
Posts: 22
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In Bioconductor the most highly used packages are DESeq and EdgeR.
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