Go Back   SEQanswers > Sequencing Technologies/Companies > MGISEQ (FKA Complete Genomics)

Similar Threads
Thread Thread Starter Forum Replies Last Post
Python commands not found at all in QIIME kmcbride Bioinformatics 0 12-14-2016 11:04 AM
looping sed commands tonybert General 2 11-06-2014 04:38 PM
filtering - find-if commands frz Bioinformatics 3 01-23-2014 03:15 PM
How to pipe Bowtie's commands Fad2012 Bioinformatics 6 04-11-2013 10:48 AM
BowTie 1 Commands ? Arupsss Bioinformatics 0 06-21-2012 09:54 AM

Thread Tools
Old 03-16-2018, 12:50 AM   #1
Jenny Tamboli
Junior Member
Location: Daman

Join Date: Mar 2018
Posts: 1
Default tRNAscan-SE linux commands

I am unable to run trnascan-SE commands on linux which are provided in trnascan-SE manual. I am using demo file provided by the software to check how the software exactly works. After running the below command,

tRNAscan-SE -p -o# -m# -f# Exampl1.fa

it shows no error and neither the desired outputs are getting generated. So I am not sure that whether the software itself is installed correctly or not. As "make testrun" is apparently used to check if software is working or not, I tried running that command also but it doesn't work either.

I will be very thankful if anyone has come across such problem and can guide me.
Thank you
Jenny Tamboli is offline   Reply With Quote

linux commands, testrun, trnascan-se

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 08:37 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO