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Hi,
Can anyone share the general pipeline to analyze 454, Illumina/Solexa data?
Thanks a lot for sharing
Can anyone share the general pipeline to analyze 454, Illumina/Solexa data?
Thanks a lot for sharing
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Edge seriously.
This is the wrong forum for this question, and you are asking the most basic of questions that really should be sought with a combination of one's own reading papers and research.
Moving to General, edge please check your private message box.
To at least take a stab at answering this question...
The starting point is almost certainly the software provided by the respective manufacturers for mapping. The remainder depends entirely on the scope of the experiment and what your questions are. (ie. SNP calling, tag counting, mutation discovery, etc) All these applications have various specialized workflows.
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