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SeqWare Query Engine: storing and searching sequence data in the cloud.
BMC Bioinformatics. 2010;11 Suppl 12:S2
Authors: O'Connor BD, Merriman B, Nelson SF
Since the introduction of next-generation DNA sequencers the rapid increase in sequencer throughput, and associated drop in costs, has resulted in more than a dozen human genomes being resequenced over the last few years. These efforts are merely a prelude for a future in which genome resequencing will be commonplace for both biomedical research and clinical applications. The dramatic increase in sequencer output strains all facets of computational infrastructure, especially databases and query interfaces. The advent of cloud computing, and a variety of powerful tools designed to process petascale datasets, provide a compelling solution to these ever increasing demands.
PMID: 21210981 [PubMed - indexed for MEDLINE]
More...
SeqWare Query Engine: storing and searching sequence data in the cloud.
BMC Bioinformatics. 2010;11 Suppl 12:S2
Authors: O'Connor BD, Merriman B, Nelson SF
Since the introduction of next-generation DNA sequencers the rapid increase in sequencer throughput, and associated drop in costs, has resulted in more than a dozen human genomes being resequenced over the last few years. These efforts are merely a prelude for a future in which genome resequencing will be commonplace for both biomedical research and clinical applications. The dramatic increase in sequencer output strains all facets of computational infrastructure, especially databases and query interfaces. The advent of cloud computing, and a variety of powerful tools designed to process petascale datasets, provide a compelling solution to these ever increasing demands.
PMID: 21210981 [PubMed - indexed for MEDLINE]
More...