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Old 01-27-2010, 12:38 PM   #1
mlee
Junior Member
 
Location: sf

Join Date: Jan 2010
Posts: 2
Question convert Maq to SAM

Hello,

I am still a beginner to Linux and I have been trying to convert my Maq output to SAM using SAMtools but I keep getting "Bus error" on my terminal. Am I typing in the command wrong?

This is my command: samtools maq2sam-long -in testrun.map -out testrun.sam

I appreciate your help!

M
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