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Is there any other way to extract the reads from SFF files without using sfffile and/or sffinfo? I know MatLab can also perform this task but I guess I am looking for a different option.
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One I know of but have no experience with is mentined here: http://blog.malde.org/index.php/2008...binary-format/ -
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kmcarr
Thank you very much! I have read a lot about sff extract and I just simply forgot about it. Now I just need to find out whether sff_extract can split the files by MIDs and I will be good to go.Last edited by Xterra; 06-28-2010, 07:15 AM.Comment
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Why don't you want to use sffinfo/sfffile? It's fast and simple :-)Comment
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: )
I am actually using sfftools now but I am trying to migrate my pipeline to Windows.Comment
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