Is there a consensus now whether we should remove duplicates for PE reads?
I think for SE reads, removal is no good because of higher ratio of true duplicates to PCR duplicates.
PE reads should have a lower ratio but is it low enough to warrant duplicates removal???
Thanks in advance!
I think for SE reads, removal is no good because of higher ratio of true duplicates to PCR duplicates.
PE reads should have a lower ratio but is it low enough to warrant duplicates removal???
Thanks in advance!
Comment