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Thread | Thread Starter | Forum | Replies | Last Post |
Is it possible to convert a SNP.txt to a bed file or get a SNP.bed from samtools? | Ling | Bioinformatics | 7 | 04-02-2015 07:17 AM |
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Is there a BED file format validator? Does a BED file have to be sorted position? | LauraSmith | Bioinformatics | 3 | 05-21-2013 12:54 PM |
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#1 |
Senior Member
Location: chicago Join Date: Jul 2012
Posts: 354
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Is there a command or tool that will index a bed file. I have sorted it, but is it necessary to index it as well? Thank you
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#2 |
Senior Member
Location: East Coast USA Join Date: Feb 2008
Posts: 7,080
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What command are you trying to run? No indexing should be needed for a bed file.
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#3 |
Senior Member
Location: chicago Join Date: Jul 2012
Posts: 354
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No command was used, I guess it was just more out of curiosity and for me to know as I am started to do more and more bioinformatics with NGS data. Thank you
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