what is third column in the log file output for pacBioToCa
I used pacBioToCa to correct some long reads LR using illumina short reads SR
from the log file there is this info:
INPUT_NAME OUTPUT_NAME SUBREAD START END LENGTH
S1_1217 ec_pacbio_2015073_1 1 2 521 519
S1_1217 ec_pacbio_2015073_13 13 4401 5139 738
S1_1218 ec_pacbio_2015074_1 1 2 882 880
S1_1219 ec_pacbio_2015075_4 4 551 1107 556
what is the subread number , start and end columns
is the subread means that the program divided the original read to this number of reads? for example in the second row is ec_pacbio_2015073_13 contains 13 subread?
from the log file there is this info:
INPUT_NAME OUTPUT_NAME SUBREAD START END LENGTH
S1_1217 ec_pacbio_2015073_1 1 2 521 519
S1_1217 ec_pacbio_2015073_13 13 4401 5139 738
S1_1218 ec_pacbio_2015074_1 1 2 882 880
S1_1219 ec_pacbio_2015075_4 4 551 1107 556
what is the subread number , start and end columns
is the subread means that the program divided the original read to this number of reads? for example in the second row is ec_pacbio_2015073_13 contains 13 subread?