Hello,
Can any one tell me how to convert SAM to SOAP output format, to use with the SOAPsnp.
Can any one tell me how to convert SAM to SOAP output format, to use with the SOAPsnp.
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I could not find any utilities for this myself, so I wrote my own perl script.
Best of luck!
helpful resources on soap and sam formatting:
http://samtools.sourceforge.net/SAM1.pdf -
re
hi could you post ur scriptComment
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