Unconfigured Ad

Collapse
X
 
  • Filter
  • Time
  • Show
Clear All
new posts
  • pepsi_MAX_cherry
    Junior Member
    • May 2017
    • 1

    How do I map Affymetrix probe IDs to gene symbols in R?

    I have an ExpressionSet, combArr.eset, that contains Affymetrix Human Genome U133 Plus 2.0 Array gene expression data. I also have a matrix, exprs_combArr.eset, that contains the expression data for combArr.eset. The row names for exprs_combArr.eset are the hgu133plus2 probe IDs, and the column names are the Gene Expression Omnibus sample IDs.

    I'd like to change the probe IDs in exprs_combArr.eset to their corresponding gene symbols, but I'm not sure how to do this.

    I've retrieved the hgu133plus2SYMBOL object from the hgu122plus2.db package, which contains the mappings between manufacturer identifiers and gene abbreviations, but I'm not sure how to use this to change the probe IDs in exprs_combArr.eset.

    I'm new to R and Bioconductor, and programming in general, so any help would be appreciated.
    Thank you!

Latest Articles

Collapse

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by SEQadmin2, 06-09-2026, 11:58 AM
0 responses
25 views
0 reactions
Last Post SEQadmin2  
Started by SEQadmin2, 06-05-2026, 10:09 AM
0 responses
32 views
0 reactions
Last Post SEQadmin2  
Started by SEQadmin2, 06-04-2026, 08:59 AM
0 responses
39 views
0 reactions
Last Post SEQadmin2  
Started by SEQadmin2, 06-02-2026, 12:03 PM
0 responses
62 views
0 reactions
Last Post SEQadmin2  
Working...