Identifying human disease SNPs

You are currently viewing the SEQanswers forums as a guest, which limits your access. Click here to register now, and join the discussion

BetterPrimate

Member

Join Date: May 2010

Posts: 15
- Share
- Tweet
#1

Identifying human disease SNPs

11-04-2010, 05:03 PM

Does anyone know how to check sequenced nucleotide variants against known disease variants?

In HGMD the variant coordinates are by codon position with the cDNA. Is there a way to map this information to genomic coordinates? Is there a more useful database out there?
Tags: hgmd coordinates
KevinLam

Senior Member

Join Date: Nov 2009

Posts: 204
- Share
- Tweet
#2

11-05-2010, 05:40 AM

I am looking for the same answer as well.
I am currently thinking or looking for dbs that link OMIM with dbSNP.. have you found any other answers?

http://kevin-gattaca.blogspot.com/
Comment

Previous template Next

Topics	Statistics	Last Post
Sequencing the Two-Toed Sloth Genome Reveals Jumping Genes Tied to Its Extreme Metabolism by SEQadmin2 Started by SEQadmin2, 06-09-2026, 11:58 AM	0 responses 30 views 0 reactions	Last Post by SEQadmin2 06-09-2026, 11:58 AM
A New Method Makes Hantavirus Genome Analysis Faster and More Accessible by SEQadmin2 Started by SEQadmin2, 06-05-2026, 10:09 AM	0 responses 38 views 0 reactions	Last Post by SEQadmin2 06-05-2026, 10:09 AM
A New Single-Cell Method Maps DNA-Protein Interactions by SEQadmin2 Started by SEQadmin2, 06-04-2026, 08:59 AM	0 responses 43 views 0 reactions	Last Post by SEQadmin2 06-04-2026, 08:59 AM
Long-Read RNA Sequencing Uncovers a Hidden Layer of Immune Cell Regulation by SEQadmin2 Started by SEQadmin2, 06-02-2026, 12:03 PM	0 responses 64 views 0 reactions	Last Post by SEQadmin2 06-02-2026, 12:03 PM

Working...

Unconfigured Ad