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  • Masta
    Junior Member
    • Feb 2011
    • 4
    #1

    Annovar files

    Hey guys,

    I had a quick question related to the bioinformatic project I am currently working on...

    The annovar tool generates two files to classify them as intergenic, intronic, non-synonymous SNP, frameshift deletion, large-scale duplication, etc.
    What I am not able to get is what are these two files for?

    Sorry if this is naive, but I am a computer scientist by profession and this is my first of its kind foray in molecular biology and genomics
    Tags: None
  • Masta
    Junior Member
    • Feb 2011
    • 4
    #2
    Oh nevermind.. I got it
    Just in case you did not know... If the mutations is exonic, the 2nd file tells you if it is sysnonymous, nonsynonymous, frameshifting, or nonsense (creating early stop codon) etc.

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