SEQanswers - Threads Tagged with coverage

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Threads Tagged with coverage

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Threads Tagged with coverage
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Low Exome Coverage with Truseq DNA Exome and NextSeq 500 workflow? mhmtgenc	12-18-2018 12:03 AM by nucacidhunter	3	307	Illumina/Solexa
	Normalization from different NGS runs genferreri	09-26-2018 06:33 AM by genferreri	2	1,590	Introductions
	How to get a report like stuff of a bam file how many percent of the exons are cover mhmtgenc	08-11-2018 06:48 PM by anoopkmr	4	1,281	Bioinformatics
	Protein annotation parameters (query or subject coverage?) pedro.cabs	07-26-2018 04:17 PM by pedro.cabs	0	584	Bioinformatics
	Subsample regions of too high coverage sbrohee	06-08-2018 03:12 AM by sbrohee	1	632	Bioinformatics
	BBMap pileup questions rmf	06-06-2018 05:28 AM by silask	3	1,299	Bioinformatics
	velvetg coverage parameter laura123	04-16-2018 05:32 AM by laura123	0	549	Bioinformatics
	Low K-mer coverage from a SPAdes assembly berthenet	02-05-2018 12:59 AM by berthenet	2	1,923	De novo discovery
	No coverage or very low coverage in the Complete Genomics data raman91	01-10-2018 11:42 PM by raman91	5	1,049	Bioinformatics
	Algebraic operations with genomic occupancy data __sequence	11-25-2017 04:20 AM by __sequence	2	953	Bioinformatics
	Minimum sequencing (and coverage) requirement for human ATAC-seq libraries? lobbytruckers	09-01-2017 05:56 AM by vadoue	1	2,811	Sample Prep / Library Generation
	Optimal coverage for sequencing microsatellites with Illumina tugecko	07-20-2017 12:13 PM by SNPsaurus	1	794	Illumina/Solexa
	Minimum (ir maximum) bam depth/coverage for structural variation analyses linudz	07-05-2017 06:44 AM by linudz	0	710	Bioinformatics
	Amplicon Sequencing & Reads Per Sample (Coverage) cement_head	05-05-2017 07:38 AM by cement_head	6	1,890	Illumina/Solexa
	Making a coverage track of ZNF778 RobbenStijn	02-21-2017 03:39 AM by RobbenStijn	6	1,161	Bioinformatics
	Uneven coverage across scaffold naleph	02-10-2017 07:22 AM by HESmith	7	1,550	Pacific Biosciences
	Metagenomic survey of gut microbiota - depth, tradeoff and num. of samples to include vaxherra	02-06-2017 04:05 PM by vaxherra	0	1,708	Metagenomics
	BED to RefSeq gene format gmarco	01-26-2017 07:17 AM by Ronic	3	3,098	Bioinformatics
	Coverage Estimates from Masked/Unmasked Genome Magpie101	11-04-2016 01:14 PM by dpryan	2	1,012	Bioinformatics
	High percentage of Off-target reads finswimmer	10-20-2016 10:12 PM by finswimmer	2	1,432	Illumina/Solexa
	Read depth differs between bcftools and bam-readcount gwilymh	10-11-2016 02:12 PM by gwilymh	0	1,203	Bioinformatics
	Low coverage after alignment Rangika	09-28-2016 08:57 PM by Rangika	0	1,086	Bioinformatics
	Minimum contig coverage to keep sebl	09-10-2016 11:36 PM by Brian Bushnell	3	3,977	De novo discovery
	Pooling across lanes and depth darthsequencer	05-07-2016 10:52 AM by LOH	2	1,334	Illumina/Solexa
	Difference between sequence coverage and physical coverage sircamp	01-15-2016 04:34 AM by dpryan	1	2,296	Bioinformatics
	Sequence Coverage and Genome Insertion lenght from SAM sircamp	01-14-2016 04:20 AM by GenoMax	1	1,333	Bioinformatics
	Using BBMap to determine possible repeat scaffolds/contigs antifolate	01-06-2016 11:14 PM by antifolate	10	2,824	Bioinformatics
	Getting coverage of each contig from velvet output antifolate	12-15-2015 07:31 PM by antifolate	0	1,244	Bioinformatics
	Coverage plots with inferred fragment sequence from PE reads rnaeye	12-03-2015 08:46 AM by rnaeye	2	1,241	Bioinformatics
	calculus of kmer coverage per chromosomes paumarc	11-10-2015 07:53 AM by GenoMax	1	1,096	Bioinformatics

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