SEQanswers - Threads Tagged with coverage

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Threads Tagged with coverage

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Threads Tagged with coverage
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	velvetg coverage parameter laura123	04-16-2018 04:32 AM by laura123	0	104	Bioinformatics
	Low K-mer coverage from a SPAdes assembly berthenet	02-04-2018 11:59 PM by berthenet	2	581	De novo discovery
	No coverage or very low coverage in the Complete Genomics data raman91	01-10-2018 10:42 PM by raman91	5	623	Bioinformatics
	BBMap pileup questions rmf	12-20-2017 10:10 AM by GenoMax	1	471	Bioinformatics
	Algebraic operations with genomic occupancy data __sequence	11-25-2017 03:20 AM by __sequence	2	531	Bioinformatics
	Minimum sequencing (and coverage) requirement for human ATAC-seq libraries? lobbytruckers	09-01-2017 04:56 AM by vadoue	1	1,693	Sample Prep / Library Generation
	Optimal coverage for sequencing microsatellites with Illumina tugecko	07-20-2017 11:13 AM by SNPsaurus	1	468	Illumina/Solexa
	Minimum (ir maximum) bam depth/coverage for structural variation analyses linudz	07-05-2017 05:44 AM by linudz	0	348	Bioinformatics
	Amplicon Sequencing & Reads Per Sample (Coverage) cement_head	05-05-2017 06:38 AM by cement_head	6	1,256	Illumina/Solexa
	Making a coverage track of ZNF778 RobbenStijn	02-21-2017 02:39 AM by RobbenStijn	6	689	Bioinformatics
	Uneven coverage across scaffold naleph	02-10-2017 06:22 AM by HESmith	7	1,028	Pacific Biosciences
	Metagenomic survey of gut microbiota - depth, tradeoff and num. of samples to include vaxherra	02-06-2017 03:05 PM by vaxherra	0	1,248	Metagenomics
	BED to RefSeq gene format gmarco	01-26-2017 06:17 AM by Ronic	3	2,574	Bioinformatics
	Coverage Estimates from Masked/Unmasked Genome Magpie101	11-04-2016 12:14 PM by dpryan	2	691	Bioinformatics
	High percentage of Off-target reads finswimmer	10-20-2016 09:12 PM by finswimmer	2	918	Illumina/Solexa
	Read depth differs between bcftools and bam-readcount gwilymh	10-11-2016 01:12 PM by gwilymh	0	742	Bioinformatics
	Low coverage after alignment Rangika	09-28-2016 07:57 PM by Rangika	0	747	Bioinformatics
	Minimum contig coverage to keep sebl	09-10-2016 10:36 PM by Brian Bushnell	3	2,450	De novo discovery
	Pooling across lanes and depth darthsequencer	05-07-2016 09:52 AM by LOH	2	933	Illumina/Solexa
	Difference between sequence coverage and physical coverage sircamp	01-15-2016 03:34 AM by dpryan	1	1,479	Bioinformatics
	Sequence Coverage and Genome Insertion lenght from SAM sircamp	01-14-2016 03:20 AM by GenoMax	1	884	Bioinformatics
	Using BBMap to determine possible repeat scaffolds/contigs antifolate	01-06-2016 10:14 PM by antifolate	10	2,128	Bioinformatics
	Getting coverage of each contig from velvet output antifolate	12-15-2015 06:31 PM by antifolate	0	859	Bioinformatics
	Coverage plots with inferred fragment sequence from PE reads rnaeye	12-03-2015 07:46 AM by rnaeye	2	892	Bioinformatics
	calculus of kmer coverage per chromosomes paumarc	11-10-2015 06:53 AM by GenoMax	1	802	Bioinformatics
	Calculating coverage based on full insert size from paired-end data rnaeye	11-09-2015 09:49 AM by Brian Bushnell	3	1,810	Bioinformatics
	Cufflinks v2.2.1 : FPKM = 0 and coverage=0, but read maps to locus vishakad	10-26-2015 10:09 PM by vishakad	3	2,923	RNA Sequencing
	Difference between coverage, depth of coverage and targeted coverage hanco	10-19-2015 04:36 PM by hanco	6	2,507	Ion Torrent
	Help: Gene Copy Number for individual organism (not CNV) IKnowNothing	10-12-2015 01:56 PM by IKnowNothing	3	992	Bioinformatics
	Samtools mpileup: Discrepancies in indel coverage christian.ruckert	09-30-2015 01:25 AM by christian.ruckert	0	921	Bioinformatics

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