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alignment assembly atac-seq bash bbduk bbmap bbtools bcl2fastq bioinfomatics bioinformactics bioinformatics bowtie2 cancer challenge chip seq computational biology data analysis demultiplexing deseq2 dna-seq epigenetics error fasta fastq ffpe genetics genome assembly genomics hisat2 illumina index introduction library prep library preparation linux machine learning mapping metagenomics methylation minion miseq multi-omics nextseq nextseq 500 ngs novaseq omics pacbio precisionfda programming python qiagen quality control reads rna rna-seq rna-seq advice rna-seq beginner rnaseq rnaseq alignment rna sequencing rrbs salmon sequencing software statistics trimmomatic truseq wgs workshop

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