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adapters app-a-thon assembly atac-seq bash bbduk bbmap bcl2fastq biocompute bioconductor bioinformactics bioinformatics bioinformatics analysis bwa cancer challenge data analysis demultiplexing deseq2 epigenetics error fasta fastq ffpe genomics gwas illumina index introduction library prep library preparation linux machine learning mapping metagenomics methylation microbiome minion miseq nanopore nextseq 500 ngs novaseq pacbio precisionfda programming python qiagen quality control reads rna rna-seq rna-seq advice rna-seq beginner rnaseq rnaseq alignment rrbs samtools sequencing single cell small rna smrt analysis smrt link smrt sequencing software statistics unix vcf wgs workshop

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