SEQanswers - Threads Tagged with fastqc

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Threads Tagged with fastqc

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Threads Tagged with fastqc
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Is a compositional bias in Sequence Content of initial bases in WES reads normal? geeneticode	08-10-2020 11:18 AM by geeneticode	2	1,345	Bioinformatics
	fastqc shows strange GC content frymor	11-14-2018 11:56 PM by nucacidhunter	4	1,694	Bioinformatics
	Opinion on FastQC output for HiSeq 4000 PE sequencing run quokka	08-05-2018 04:46 PM by luc	2	1,977	Illumina/Solexa
	FastQC results for 16s reads MiniMicrobe	05-24-2018 07:27 AM by MiniMicrobe	2	5,583	Metagenomics
	Problem with trimming after FastQC barthez95	05-12-2018 01:57 AM by barthez95	0	1,524	Bioinformatics
	Ribo-zero - FastQC plots - Per sequence GC content Elsie	04-10-2018 02:58 PM by GenoMax	2	3,036	RNA Sequencing
	low GC% peak in one end of paired end reads AlexCalderwood	04-04-2018 04:37 AM by AlexCalderwood	7	3,278	RNA Sequencing
	Fastqc salvadorherrandoperez	01-24-2018 04:49 AM by GenoMax	3	2,214	RNA Sequencing
	FastQC, v0.11.5, error: Too many tiles ... echo manolis	01-19-2018 11:44 PM by echo manolis	2	2,644	Bioinformatics
	Two peaks on FastQC plot "Per sequence GC content" ( 1 2) Tommyliu	12-30-2017 09:27 AM by Dr khani	20	23,376	Illumina/Solexa
	5' Kmers problem with whole genome re-sequencing data DeondeJager	09-11-2017 11:04 AM by Brian Bushnell	5	2,690	Bioinformatics
	Understanding FastQC output before Vs after trim_galore anandksrao	07-24-2017 05:20 AM by GenoMax	1	2,624	Illumina/Solexa
	Variable per tile sequence quality across amplicon-seq fastqs dross11	06-15-2017 12:58 AM by dross11	2	1,940	Illumina/Solexa
	MultiQC - a new tool to create summary reports from any analysis output ( 1 2) ewels	06-01-2017 01:03 AM by ewels	24	11,712	Bioinformatics
	Fastqc Per sequence quality scores - Two peaks? Wilro	05-21-2017 03:44 AM by nucacidhunter	4	2,421	Bioinformatics
	K-mer content failed on 5' end - advice needed Vinn	04-26-2017 02:56 PM by Vinn	8	2,998	Bioinformatics
	Trying to remove nextera transposase sequence using cutadapt and fastqc ClemBuntu	04-26-2017 08:34 AM by sagarutturkar	9	19,235	Bioinformatics
	Low gene count assignment for ribo-depleted RNA-Seq data gabe_rosser	04-24-2017 03:10 AM by gabe_rosser	4	2,753	RNA Sequencing
	Cutadapt trimming issues Bernadeta	04-21-2017 05:41 AM by Bernadeta	0	1,857	Bioinformatics
	Reason for POOR per tile sequence quality Justin87	03-14-2017 06:37 AM by GW_OK	2	2,617	Illumina/Solexa
	FastQC Report hamcan	11-28-2016 10:28 AM by Brian Bushnell	10	4,554	Bioinformatics
	Weird overrepresented K-mers in FastQC EcoRInya	11-17-2016 01:53 AM by EcoRInya	2	2,339	Illumina/Solexa
	Demultiplexing disabling FastQC Bourney	03-15-2016 01:02 AM by Bourney	9	3,199	Bioinformatics
	Adapter_and_kmer_trimming kostask	01-22-2016 06:58 PM by Brian Bushnell	3	2,366	Bioinformatics
	k-mers in the middle of the read A-K	12-09-2015 12:42 AM by A-K	3	2,448	Bioinformatics
	Struggling with quality trimming Alex852013	12-02-2015 01:52 PM by GenoMax	3	2,728	Introductions
	fastqc Exception (error) frymor	11-27-2015 05:31 AM by frymor	2	2,906	Bioinformatics
	Sequence Quality for large number of fastqs bio_informatics	11-12-2015 10:55 AM by Brian Bushnell	14	3,396	Bioinformatics
	FastQC in a pipeline graceqy	10-07-2015 12:14 PM by GenoMax	1	3,033	Bioinformatics
	Mate Pair QC cwisch88	09-30-2015 01:11 PM by cwisch88	1	2,826	Bioinformatics

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