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Threads Tagged with differential expression

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Threads Tagged with differential expression
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	Last chance to register for online RNA-Seq Workshop June 1-4 najoshi	05-26-2020 10:06 PM by najoshi	0	1,070	Bioinformatics
	DESeq2 interaction term results differ between full dataset & subset cjag	05-15-2020 05:11 PM by cjag	0	1,080	Bioinformatics
	best bioinformatic methods for identification of miRNAs for differential expression lcabus	03-16-2020 09:12 AM by lcabus	0	807	Bioinformatics
	Account for confounding factor with big effect - experimental design AndreaWall	03-14-2019 05:36 AM by AndreaWall	0	1,271	Bioinformatics
	Can I test for differential expression using FPKM values? JonB	03-05-2018 03:11 AM by atulchandra	7	7,767	Bioinformatics
	long noncoding RNA DE analysis frymor	02-10-2018 09:48 AM by frymor	0	1,381	Bioinformatics
	How can I specify DEseq2 to only perform comparisons on which I am interested with ? oliver.sacks	01-11-2018 01:51 PM by sdriscoll	1	2,853	RNA Sequencing
	DEIVA: a web application for interactive visual analysis of differential gene express anton.kratz	11-03-2017 05:51 PM by anton.kratz	7	5,103	Bioinformatics
	RNA-seq datasets with multiple factors siazd	08-22-2017 06:27 AM by SeqAn30	1	1,729	Bioinformatics
	How did the edgeR authors compute Figure 2 (genewise deviance statistics?) gabe_rosser	03-28-2017 09:20 AM by gabe_rosser	0	1,670	Bioinformatics
	edgeR:prior.df value Linas	03-15-2017 02:41 AM by Linas	0	1,559	Bioinformatics
	Recommended pipeline for differential miRNA-seq AlexClop	03-08-2017 11:22 PM by sbarberan	1	2,722	Bioinformatics
	DESeq2: outlier detection problem gstone	01-24-2017 12:05 PM by gstone	2	2,665	Bioinformatics
	$differential expression, down-regulation, fraction of genes, rna-seq, up-regulation$ fraction of genes up- and down- regulated velu	01-17-2017 09:41 PM by velu	0	1,640	RNA Sequencing
	How to identify differentially expressed genes within a single sample group? BhariD	12-01-2016 04:18 AM by wdecoster	3	2,216	Bioinformatics
	DESeq2 fold change does not match normalized counts data mrandel	10-29-2016 11:52 AM by dpryan	1	3,246	Bioinformatics
	Limma multifactor experiment design matrix Lugalbanda	10-19-2016 01:12 AM by dpryan	3	2,615	Bioinformatics
	RNA-Seq on clonal pools anlun	10-07-2016 07:38 AM by anlun	0	1,524	RNA Sequencing
	Help with genes.gct file on IGV mavadhani	10-05-2016 10:24 AM by mavadhani	0	1,680	RNA Sequencing
	Is Fold Change reliable? Does anyone use Characteristic Direction? hubertofliege	07-20-2016 12:30 AM by dariober	2	2,048	Bioinformatics
	Differential Expression "categorisation" BeKl	04-20-2016 12:27 PM by marRoma	11	2,700	Bioinformatics
	Differential expression of small subset of genes from RNASeq dataset Tryptamine	03-09-2016 10:17 AM by Tryptamine	0	2,365	RNA Sequencing
	Looking for advice on generating a transcriptome from mapped .bam or .sam files ovon	02-21-2016 11:18 PM by ovon	2	2,342	Bioinformatics
	Differential expression analysis using DESeq for TCGA data alrossi	02-02-2016 08:46 AM by alrossi	0	2,620	Bioinformatics
	Differential expression gene list from TCGA level 3 RNASeq V2 datasets downloaded fro Zeenia Jagga	01-28-2016 01:51 AM by Zeenia Jagga	0	2,832	Bioinformatics
	Motif enrichment in MEME - CentriMo cdias	12-24-2015 02:18 PM by epigenereg	1	2,961	Epigenetics
	differential expression analysis in non-model species - best practice? evt8	12-09-2015 12:22 AM by gringer	2	2,911	RNA Sequencing
	Bacterial RNA-Seq Differential Gene Expression Biological Reps vs Exp Conditions beki.renberg	11-24-2015 10:32 AM by beki.renberg	7	3,121	RNA Sequencing
	differential expression (DE) anj_1	11-18-2015 07:13 PM by anj_1	4	2,080	RNA Sequencing
	Ngs data analysis bassu	10-12-2015 04:28 AM by rinku.y8448@gmail.com	4	5,354	General

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