SEQanswers - Threads Tagged with count

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Threads Tagged with count

Threads Tagged with count
	Thread / Thread Starter	Last Post	Replies	Views	Forum
	What does teh 51-mer count distribution plot in Preqc Output represent? xn3x	09-22-2016 09:22 AM by Brian Bushnell	1	1,696	Bioinformatics
	intersect file bam-bed and count read edeka	06-20-2016 02:34 AM by edeka	3	3,769	Bioinformatics
	How to count the reads mapping to different regions from tophat output vivienne_lovely	04-19-2016 10:39 AM by bvk	5	6,879	RNA Sequencing
	Assigning reads to genes in the absence of genomic annotation moldach	03-09-2016 01:20 PM by shi	8	4,677	RNA Sequencing
	Annotate gene list BM7	09-11-2015 05:46 AM by cmccabe	1	2,565	Bioinformatics
	Counting the total number of SNPs in a transcript dena.dinesh	08-11-2015 05:47 AM by dena.dinesh	0	1,440	Bioinformatics
	Count BLAST hits and 'no hits' fibar	12-17-2014 12:28 AM by maubp	1	2,227	Bioinformatics
	Error in htseq-count. Large gaps in CIGAR string usha	09-19-2014 12:21 PM by Brian Bushnell	1	1,772	Bioinformatics
	Count reads around breakpoint (rna-seq) spoonman	07-29-2014 06:09 AM by spoonman	0	2,603	Bioinformatics
	HTSeq exon counts to gene level Minty	06-18-2014 04:48 AM by Minty	10	4,478	RNA Sequencing
	Creating a gtf file for the database I mapped against lanner	05-06-2014 12:18 AM by mikep	1	2,106	Bioinformatics
	No reads mapped using BWA SOLiD lanner	05-05-2014 11:58 AM by lanner	1	1,777	Bioinformatics
	Online tools to generate count tables from sam/bam files lanner	05-05-2014 08:26 AM by maubp	4	3,513	Bioinformatics
	filtering - find-if commands frz	01-23-2014 02:15 PM by dpryan	3	2,305	Bioinformatics
	Python counting bases fasta file illinu	08-22-2013 08:17 AM by CHObot	9	11,643	Bioinformatics
	Align reads to 1 gene vishalthapar	05-24-2013 07:34 AM by chadn737	2	1,620	Bioinformatics
	Alternative to cufflinks? - Bam to count table? hbt	11-09-2012 06:09 AM by syfo	3	4,954	Bioinformatics
	Roche NimbleGen number of bases Orr Shomroni	07-31-2012 06:15 AM by Orr Shomroni	0	1,673	General
	longest possible insert length & variable insert lengths lcarey	06-12-2012 11:05 PM by lcarey	0	3,839	Illumina/Solexa
	How to count aligned RNA-seq reads after sequenced and aligned by Illumina? IceWater	04-05-2012 09:18 AM by IceWater	5	3,577	Illumina/Solexa
	htseq count missing last mapped fragment mapardo	11-08-2011 05:27 AM by mapardo	2	3,401	RNA Sequencing
	DESeq: Read counts vs. BP counts burkard	08-05-2010 11:52 PM by burkard	0	4,261	Bioinformatics

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